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Trey Ideker: Visualizing Gene and Protein Networks

Trey Ideker ( discusses methods for visualizing high-throughput protein-protein and protein-DNA interaction data, which often produce the infamous 'hairballs'. He presents several compelling examples, using the widely-used Cytoscape tool he founded, that demonstrate how network comparison and other methods focusing on biological or bio-medically relevant questions can identify sub-networks that are easily manageable. This talk was presented at VIZBI 2011, an international conference series on visualizing biological data ( funded by NIH & EMBO. This video was filmed and distributed with permission under a creative common license.

This video can be downloaded here.