VIZBI tutorial: Visualization with Cytoscape and STRING

Posted by Angela Maquinto on 28, May, 2017

This tutorial will be presented by Lars Juhl Jensen and Jessica Xin Hu (Tuesday, 13 June, 2:00 pm – 5:00 pm), they will discuss the fundamentals of the Cytoscape network visualization tool and the STRING database, which integrates known and predicted protein associations from a variety of evidence types. Participants will be able to interpret protein associations correctly and understand the uses of Cytoscape and its STRING App.

Cytoscape

VIZBI tutorial: Compelling Narrative and Storytelling into DataViz

Posted by Angela Maquinto on 27, May, 2017

It is now recognized that the skills of data storytelling and narrative development are becoming as crucial as statistical analysis and data analytics. In this tutorial, Paul Hodge will take you on a journey through entertaining and informative examples of world-class Data Visualisations, its frameworks and how to build a compelling Data Visualizations that will engage, entertain and inspire future decision makers (Tuesday, 13 June, 2:00 pm – 5:00 pm).

Paul

VIZBI tutorial: Data Visualization with Epiviz

Posted by Angela Maquinto on 26, May, 2017

Epiviz is an interactive visualization tool for functional genomics data. It supports genome navigation like other genome browsers but allows multiple linked visualizations of data within genomic regions using scatterplots, heatmaps, and other user-supplied visualizations. It has a close connection to the R/Bioconductor genomics data analysis platform for flexible computational and visual exploratory analysis. Hector Corrado-Brava will introduce to students -the use of Epiviz for exploratory analysis of data using interactive visualization and computation (Tuesday, 13 June, 9:30 am – 12:30 am).

fig_use_case_hcb

Poster upload closing soon

Posted by Angela Maquinto on 25, May, 2017

Poster upload for VIZBI 2017 is closing on 23:59 PST on 31 May 2017. Immediately after uploading, you will be able to preview a zoomable version of your poster, showing how it will appear on the VIZBI poster pages. Click here for more details.

poster 2016

VIZBI tutorial: Analysis of AFM Data from Biological Samples

Posted by Angela Maquinto on 25, May, 2017

The analysis of AFM data from biological samples can be intimidating and unwieldy. In this tutorial, Siobhan Braybrook will discuss experimental design considerations based on example biological questions, data analysis models and quality control metrics. She will also cover how the returned results relate to the biological sample in question (Tuesday, 13 June, 2:00 pm – 5:00 pm).

Siobhan

VIZBI tutorial: Data Visualization in R

Posted by Angela Maquinto on 23, May, 2017

There is a growing need for effective visualizations of complex data structures which combine scientific thinking, statistical analyses, and successful storytelling. In this tutorial, Nenad Bartonicek (Garvan Institute, Sydney) leads you through the process of decision-making, data transformation and effective communication of graphs in R (Tuesday, 13 June, 9:30 am  -12:30 pm).

Nenad

Autodesk Art & Biology Award

Posted by VIZBI on 18, May, 2017

We are pleased to announce that – as with previous years – Autodesk have agreed to sponsor a prize for the most visually compelling and original ‘Art & Biology’ submission. Each VIZBI participant is invited to upload one artistically-inspired image, which will be featured on the VIZBI poster gallery. The award winner will receive a one-year subscription to Autodesk Maya (valued at $1,825 CAD). Maya is widely-used for creating interactive 3D applications, video games, animated film, TV series, and visual effects. The prize is offered to participants from academics and industry alike, but cannot be resold. The Art & Biology entries will be unveiled during the Art & Biology evening on Thursday, June 15, and the winner will be announced on June 16 during the closing session. For details see the VIZBI 2017 poster page. The deadline for upload is May 31 at 23:59 CET.

AutodeskMaya

Tamara Munzner’s keynote from VIZBI 2011

Posted by VIZBI on 17, May, 2017

Tamara Munzner will be a keynote speaker at VIZBI 2017 (Sydney, 14-16 June); she has worked on visualization projects in a broad range of application domains, including genomics, evolutionary biology, geometric topology, computational linguistics, large-scale system administration, web log analysis, and journalism.

Tamara was also a keynote speaker at VIZBI 2011 (Broad Institute of MIT & Harvard, USA), where she presented lucid and very useful guidelines for creating effective visualizations. She highlighted the advantages of 2D representation – compared with 3D, immersive, or animated visualizations – and described methods to reduce the viewer’s cognitive load, and to validate visualizations. A video of Tamara’s 2011 keynote can be viewed here.

tamaramunzner

NVIDIA Award for Best Scientific Poster

Posted by VIZBI on 16, May, 2017

M6000 infographicWe are pleased to announce that – as with previous years – NVIDIA have agreed to sponsor a generous prize for the poster that best exemplifies the use of data visualization to gain clear, compelling insight into an important scientific problem. The award winner will receive a Quadro M6000 card, one of the world’s most powerful GPUs, making real-time photorealistic rendering possible for even complex scenes. It can drive up to four 4K displays simultaneously, and its 3,072 CUDA cores make it perfect for many scientific applications. To upload your poster, use the submission link in your VIZBI registration email. Accepted posters will be published in the VIZBI poster gallery. The deadline for upload is May 31 at 23:59 CET.

Drew Berry’s keynote from VIZBI 2011

Posted by Angela Maquinto on 16, May, 2017

Drew Berry will be a keynote speaker at VIZBI 2017 (Sydney, 14-16 June); his animations have received international recognitions including an Emmy (2005) in the category of Outstanding Science, Technology and Nature Programming for the episode, ‘The Human Race’, and a BAFTA award (2004). He was trained as a cell biologist and microscopist, and brings a rigorous scientific approach to each project, immersing himself in relevant research to ensure his animations include up-to-date data.

He was also a keynote speaker at VIZBI 2011 (Broad Institute of MIT & Harvard, USA), where he presented spectacular highlights from his videos on the malaria life cycle at the cellular scale, on DNA replication, and on the human brain at the tissue, cell, and molecular scale. A video of Drew’s 2011 keynote can be viewed here.

drewBerry

Nature News article on ‘Visualizations Transforming Biology’

Posted by VIZBI on 15, May, 2017

In case you missed it: VIZBI 2016 (in Heidelberg, Germany) was featured in a Nature News article that examined how the right visualization can transform a biologists’ understanding of their data. Read the full article here.

Nature

VIZBI 2017 tutorial day

Posted by VIZBI on 12, May, 2017

With seven tutorials plus the Data Visualization Masterclass, you are spoilt for choice:

Morning:

Afternoon:

All-day:

Sydney Bioinformatics Research Symposium (SBRS 2017)

Posted by Angela Maquinto on 9, May, 2017

Also happening in Sydney – one day prior to VIZBI – is SBRS, a free one-day symposium at the University of Sydney (Tuesday, 13 June 2017). SBRS features two excellent international speakers, Professor Liran Carmel from Israel and Professor Geoff Barton from the UK. There are plenty of spots for oral presentation, fast-forward presentations, and poster presentations – with several prizes to win. To encourage participants from regional NSW and ACT, this year SBRS will offer a number of travel bursaries (up to $500 each) to SBRS abstract submitters who reside in regional NSW and ACT. The vision is to make SBRS a truly state-wide event for the benefit of all researchers, partitioners, and students in the field of bioinformatics and computational biology. For more information about SBRS, and to submit an abstract of your work, go to http://www.abacbs.org/sbrs2017. The abstract submission deadline is 22 May 2017.

SBRS 2017

Early registration closing soon

Posted by VIZBI on 18, April, 2017

Note that early registration for VIZBI 2017 closes April 21, 23:59 CET. To secure your ticket before prices rise, go to the VIZBI registration page.

VizbiPlus Exhibit: A showcase of science-inspired artwork

Posted by Angela Maquinto on 17, April, 2017

This event will feature an exhibit of original artwork inspired by a series of scientific stories. The artwork will be selected from submissions made to the VizbiPlus Challenge, a competition created to encourage local artists to draw from science to produce original, engaging and insightful new work. The event is the result of a new collaboration between the Spunky Bruiser Store and the VIZBI lab from the Garvan Institute of Medical Research and CSIRO.

VizbiPlus: Bridging science with art, design & animation

Posted by Angela Maquinto on 10, April, 2017

The event will feature a keynote presentation from an internationally recognized scientific artist; the unveiling of winners from a national art and science competition designed to engage the creative community. We aim to make this event the premier hub to connect the scientific and creative communities and bolster these fields by fostering creativity and innovation. VizbiPlus is happening on 12 June 2017 from 5:30 pm -7:30 pm at the Museum of Contemporary Art.

Credits: Deborah Szapiro; background art from Drew Berry

BioVis 2017 in Prague, July 24

Posted by VIZBI on 10, April, 2017

We are excited to share that BioVis 2017 will be part of the ISMB/ECCB 2017 conference held on July 24 in Prague, Czech Republic. The BioVis meetings aim to educate, inspire, and engage bioinformatics and biology researchers in state-of-the-art visualization research and visualization researchers in problems in biological data visualisation. Find out how to participate at: http://biovis.net/2017/cfp_ismb/.

The BioVis and VIZBI meetings are quite complimentary: BioVis
features a full paper track – typical for computer science meetings – while
the VIZBI lacks a paper track, instead having a format more typical for meetings in the life sciences.

BioVis

VIZBI 2017 Speaker Lineup

Posted by VIZBI on 7, April, 2017

We are pleased to announce the complete speaker lineup for VIZBI 2017. These 21 world-leading researchers will showcase visualizations transforming how life scientists view data.

Keynotes: Daniel Keim, Drew Berry, Tamara Munzner. DNA: Christian Stolte, Hector Corrada Bravo, Jim Zheng. RNA: Yue Wan, David Powell, Davis McCarthy. Proteins: Jane Richardson, Alexander Rose, Michael Landsberg. Cells: Brenda Andrews, Sean Humphrey, Lars Juhl Jensen. Tissues: Siobhan Braybrook, John McGhee, Caroline Rae. Populations: Aaron Darling, Elena Naumova, David Raubenheimer.

Speakers

VIZBI early registration extended

Posted by VIZBI on 6, April, 2017

Some of you may have had difficulties accessing the VIZBI website, due to recent server problems that are now fixed. As a result, we have extended the deadline for early registration to April 21. If you continue to experience difficulties accessing VIZBI.org, please contact us.

Early registration closing soon

Posted by Angela Maquinto on 5, April, 2017

Registration for the main conference is closing on 7 April 2017. The conference registration fee includes admission, conference materials, meals, drinks, and coffee breaks. Visit the registration page for more details.